EnhancerDB
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  3. rs5798021[chr12:47752470]
Enhancers that have rs5798021[chr12:47752470]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47747943 47766515 enh2318
Prostate (PC-3) Brain (SK-N-MC) Large Intestine Blood (T-cell) Esophagus Blood (OCI-LY7) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Spleen Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs5798021[chr12:47752470]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47751489 47756458 ZNF274 GTRD no Cervix (HeLa-S3) 108028766
chr12 47751489 47756458 ZNF274 GTRD no Cervix (HeLa-S3) 108028767
chr12 47751538 47752487 ZNF143 GTRD no Epithelial (MCF-7) 21543458
chr12 47751950 47756166 AR GTRD no Prostate (PC-3) 21543460
chr12 47751950 47756166 AR GTRD no Prostate (PC-3) 108028768
chr12 47751950 47756166 AR GTRD no Prostate (PC-3) 108028769
chr12 47752097 47755403 ZNF274 GTRD no Cervix (HeLa-S3) 108028770
chr12 47752097 47755403 ZNF274 GTRD no Cervix (HeLa-S3) 108028771
chr12 47752148 47754607 P63 GTRD no Skin (Keratinocyte) 108028772
chr12 47752163 47755158 ZNF274 GTRD no Cervix (HeLa-S3) 108028773
chr12 47752202 47755158 ZNF274 GTRD no Cervix (HeLa-S3) 108028774
chr12 47752345 47754546 ZNF274 GTRD no Cervix (HeLa-S3) 108028775
chr12 47752445 47756382 ZNF143 GTRD no Epithelial (MCF-7) 21543461
chr12 47752445 47756382 ZNF143 GTRD no Epithelial (MCF-7) 108028776
chr12 47752445 47756382 ZNF143 GTRD no Epithelial (MCF-7) 108028777
chr12 47752467 47752482 FOXP1 JASPAR yes 120700087
chr12 47752468 47752483 FOXP1 JASPAR yes 120700088
chr12 47752469 47752484 FOXP1 JASPAR yes 120700089
chr12 47752470 47752491 IRF1 JASPAR yes 120700090
Genes associated with rs5798021[chr12:47752470], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More