EnhancerDB
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  3. rs58121017[chr1:17877145]
Enhancers that have rs58121017[chr1:17877145]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17869605 17883659 enh26559
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Embryonic Stem Cell Line (H1-hESC) Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs58121017[chr1:17877145]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17877133 17877154 IRF1 JASPAR yes 27100427
chr1 17877136 17877150 IRF7 JASPAR yes 27100428
chr1 17877136 17877150 IRF8 JASPAR yes 27100429
chr1 17877138 17877150 IRF1 JASPAR yes 27100430
chr1 17877139 17877154 FOXP1 JASPAR yes 27100431
chr1 17877139 17877160 IRF1 JASPAR yes 27100432
chr1 17877140 17877155 FOXP1 JASPAR yes 27100433
chr1 17877141 17877162 IRF1 JASPAR yes 27100434
chr1 17877142 17877156 IRF7 JASPAR yes 27100435
chr1 17877142 17877157 FOXP1 JASPAR yes 27100436
chr1 17877145 17877160 STAT2 JASPAR yes 27100437
Genes associated with rs58121017[chr1:17877145], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More