EnhancerDB
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  3. rs5821909[chr17:70417977]
Enhancers that have rs5821909[chr17:70417977]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs5821909[chr17:70417977]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70415782 70418458 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784834
chr17 70415782 70418458 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108289960
chr17 70415782 70418458 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108289961
chr17 70417218 70418029 TCF7L2 UCSC Txn Factor no Conserved 108290015
chr17 70417359 70418019 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21784923
chr17 70417359 70418019 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108290064
chr17 70417433 70418029 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21784957
chr17 70417433 70418029 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 108290106
chr17 70417492 70418068 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108290124
chr17 70417963 70417978 PRDM1 JASPAR yes 55786230
chr17 70417963 70417978 STAT2 JASPAR yes 55786231
chr17 70417968 70417979 NFKB1 JASPAR yes 55786233
chr17 70417969 70417979 NFKB1 JASPAR yes 55786234
chr17 70417969 70417984 HSF1 JASPAR yes 55786235
chr17 70417970 70417983 HSF1 JASPAR yes 55786236
chr17 70417970 70417983 HSF2 JASPAR yes 55786237
chr17 70417970 70417983 HSF4 JASPAR yes 55786238
Genes associated with rs5821909[chr17:70417977], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More