EnhancerDB
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  3. rs58240175[chr1:23913703]
Enhancers that have rs58240175[chr1:23913703]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs58240175[chr1:23913703]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23907496 23914124 ZNF274 GTRD no Blood (GM12878) 21325282
chr1 23907496 23914124 ZNF274 GTRD no Blood (GM12878) 107802428
chr1 23913694 23913707 ZBTB18 JASPAR yes 27443941
chr1 23913696 23913706 FIGLA JASPAR yes 27443942
chr1 23913696 23913706 ID4 JASPAR yes 27443943
chr1 23913696 23913706 TCF3 JASPAR yes 27443944
chr1 23913696 23913706 TCF4 JASPAR yes 27443945
chr1 23913698 23913707 ZEB1 JASPAR yes 27443946
chr1 23913698 23913708 TBX21 JASPAR yes 27443947
chr1 23913699 23913707 MGA JASPAR yes 27443948
chr1 23913699 23913707 TBX15 JASPAR yes 27443949
chr1 23913699 23913707 TBX1 JASPAR yes 27443950
chr1 23913699 23913707 TBX4 JASPAR yes 27443951
chr1 23913699 23913707 TBX5 JASPAR yes 27443952
chr1 23913699 23913709 TBR1 JASPAR yes 27443953
chr1 23913699 23913712 SMAD2 JASPAR yes 27443954
chr1 23913703 23913714 FOSL2 JASPAR yes 27443955
Genes associated with rs58240175[chr1:23913703], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 23884409 23886285 - ID3 ENSG00000117318.8 23886285 27418 Pancreas 0.303024 316