EnhancerDB
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  3. rs5825272[chr18:55961841]
Enhancers that have rs5825272[chr18:55961841]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55950385 55972855 enh32735
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Lung Lung (A549) Blood (GM12878) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Blood (T-cell) Heart
Transcript factors that have rs5825272[chr18:55961841]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55961830 55961846 SOX8 JASPAR yes 110938091
chr18 55961831 55961846 FOXA1 JASPAR yes 110938092
chr18 55961833 55961845 FOXC2 JASPAR yes 110938093
chr18 55961833 55961847 ONECUT2 JASPAR yes 110938094
chr18 55961833 55961847 ONECUT3 JASPAR yes 110938095
chr18 55961834 55961845 FOXB1 JASPAR yes 110938096
chr18 55961834 55961845 FOXC1 JASPAR yes 110938097
Genes associated with rs5825272[chr18:55961841], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More