EnhancerDB
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  3. rs5839517[chr2:235193920]
Enhancers that have rs5839517[chr2:235193920]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235192981 235207115 enh6214
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs5839517[chr2:235193920]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235193915 235193930 MEF2C JASPAR yes 81862110
chr2 235193916 235193931 MEF2A JASPAR yes 81862111
chr2 235193918 235193933 FOXP1 JASPAR yes 81862112
chr2 235193919 235193925 TBP TRANSFAC yes 81862113
Genes associated with rs5839517[chr2:235193920], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More