EnhancerDB
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  3. rs5839522[chr2:235216949]
Enhancers that have rs5839522[chr2:235216949]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235207125 235220255 enh19338
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Lung (PC-9) Spleen Thymus Epithelial (MCF-7)
chr2 235216457 235217017 vista35252
VISTA
Transcript factors that have rs5839522[chr2:235216949]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235216940 235216957 BCL6B JASPAR yes 22233881
chr2 235216940 235216957 BCL6B JASPAR yes 81865622
chr2 235216943 235216958 MEF2C JASPAR yes 22233882
chr2 235216943 235216958 MEF2C JASPAR yes 81865623
chr2 235216946 235216961 FOXP1 JASPAR yes 22233883
chr2 235216946 235216961 FOXP1 JASPAR yes 81865624
chr2 235216948 235216954 TBP TRANSFAC yes 22233884
chr2 235216948 235216954 TBP TRANSFAC yes 81865625
Genes associated with rs5839522[chr2:235216949], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More