EnhancerDB
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  3. rs5839561[chr2:235743614]
Enhancers that have rs5839561[chr2:235743614]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 235728845 235759495 enh19348
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Lung
Transcript factors that have rs5839561[chr2:235743614]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 235743613 235743619 TBP TRANSFAC yes 81910505
chr2 235743613 235743624 FOXC1 JASPAR yes 81910506
chr2 235743613 235743625 FOXC2 JASPAR yes 81910507
Genes associated with rs5839561[chr2:235743614], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More