EnhancerDB
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  3. rs58494632[chr1:202002812]
Enhancers that have rs58494632[chr1:202002812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs58494632[chr1:202002812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202002348 202002955 ZNF143 GTRD no Epithelial (MCF-7) 21365492
chr1 202002398 202003087 ZNF274 GTRD no Cervix (HeLa-S3) 21365493
chr1 202002800 202002812 MEF2A JASPAR yes 34543954
chr1 202002803 202002815 MEF2A JASPAR yes 34543955
chr1 202002803 202002815 MEF2B JASPAR yes 34543956
chr1 202002803 202002815 MEF2D JASPAR yes 34543957
chr1 202002805 202002816 CDX2 JASPAR yes 34543958
chr1 202002805 202002820 FOXP1 JASPAR yes 34543959
chr1 202002806 202002817 HOXA10 JASPAR yes 34543960
chr1 202002807 202002816 CDX1 JASPAR yes 34543961
chr1 202002807 202002817 HOXA13 JASPAR yes 34543962
chr1 202002807 202002817 HOXB13 JASPAR yes 34543963
chr1 202002807 202002817 HOXD13 JASPAR yes 34543964
chr1 202002807 202002822 FOXP1 JASPAR yes 34543965
chr1 202002811 202002817 TBP TRANSFAC yes 34543966
chr1 202002811 202002826 FOXP1 JASPAR yes 34543967
Genes associated with rs58494632[chr1:202002812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More