EnhancerDB
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  3. rs58494676[chr17:78838171]
Enhancers that have rs58494676[chr17:78838171]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs58494676[chr17:78838171]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78838160 78838175 PRDM1 JASPAR yes 56286995
chr17 78838162 78838172 TBX21 JASPAR yes 56286996
chr17 78838162 78838173 TBX2 JASPAR yes 56286997
chr17 78838162 78838175 EOMES JASPAR yes 56286998
chr17 78838163 78838173 TBR1 JASPAR yes 56286999
chr17 78838163 78838180 RXRA JASPAR yes 56287000
Genes associated with rs58494676[chr17:78838171], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More