EnhancerDB
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  3. rs5852471[chr3:125916794]
Enhancers that have rs5852471[chr3:125916794]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 125915165 125937628 enh35856
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Muscle (A673) Colon (HCT116) Muscle (Myoblast) Pancreas Muscle (Myotube) Uterus Heart
Transcript factors that have rs5852471[chr3:125916794]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 125916783 125916798 MEF2C JASPAR yes 5471042
chr3 125916784 125916805 IRF1 JASPAR yes 5471043
chr3 125916785 125916800 FOXP1 JASPAR yes 5471044
chr3 125916788 125916809 IRF1 JASPAR yes 5471045
chr3 125916792 125916806 SPI1 JASPAR yes 5471046
chr3 125916792 125916806 SPIC JASPAR yes 5471047
chr3 125916792 125916807 STAT2 JASPAR yes 5471048
chr3 125916793 125916806 ELF1 JASPAR yes 5471049
chr3 125916794 125916806 EHF JASPAR yes 5471050
chr3 125916794 125916807 ELF3 JASPAR yes 5471051
Genes associated with rs5852471[chr3:125916794], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More