EnhancerDB
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  3. rs58566689[chr16:85502858]
Enhancers that have rs58566689[chr16:85502858]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85477350 85511195 enh16870
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs58566689[chr16:85502858]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85501423 85503648 ZNF143 GTRD no Epithelial (MCF-7) 21726348
chr16 85501548 85503609 ZNF143 GTRD no Epithelial (MCF-7) 21726349
chr16 85501624 85503537 ZNF143 GTRD no Epithelial (MCF-7) 21726350
chr16 85501914 85503539 ZNF143 GTRD no Epithelial (MCF-7) 21726352
chr16 85501958 85503528 ZNF143 GTRD no Epithelial (MCF-7) 21726353
chr16 85502326 85503483 ZNF143 GTRD no Epithelial (MCF-7) 21726356
chr16 85502362 85502867 ZNF274 GTRD no Bone Marrow (K562) 21726358
chr16 85502387 85503572 ZNF274 GTRD no Bone Marrow (K562) 21726359
chr16 85502442 85502901 ZNF274 GTRD no Bone Marrow (K562) 21726360
chr16 85502508 85502942 ZNF274 GTRD no Bone Marrow (K562) 21726361
chr16 85502774 85503739 ZNF274 GTRD no Bone Marrow (K562) 21726362
chr16 85502853 85502868 MEF2C JASPAR yes 12065474
chr16 85502854 85502869 MEF2A JASPAR yes 12065475
chr16 85502856 85502871 FOXP1 JASPAR yes 12065476
chr16 85502857 85502863 TBP TRANSFAC yes 12065477
chr16 85502858 85502873 FOXP1 JASPAR yes 12065478
chr16 85502858 85502879 IRF1 JASPAR yes 12065479
Genes associated with rs58566689[chr16:85502858], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More