EnhancerDB
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  3. rs58643936[chr1:230224720]
Enhancers that have rs58643936[chr1:230224720]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230203175 230225395 enh12769
Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs58643936[chr1:230224720]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230224714 230224729 HSF1 JASPAR yes 36020337
chr1 230224715 230224728 HSF1 JASPAR yes 36020338
chr1 230224715 230224728 HSF2 JASPAR yes 36020339
chr1 230224715 230224728 HSF4 JASPAR yes 36020340
Genes associated with rs58643936[chr1:230224720], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More