EnhancerDB
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  3. rs5873323[chr5:171857872]
Enhancers that have rs5873323[chr5:171857872]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171850545 171880495 enh22807
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs5873323[chr5:171857872]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171857856 171857877 IRF1 JASPAR yes 67789130
chr5 171857858 171857879 IRF1 JASPAR yes 67789131
chr5 171857862 171857883 IRF1 JASPAR yes 67789132
chr5 171857864 171857879 PRDM1 JASPAR yes 67789133
chr5 171857864 171857879 STAT2 JASPAR yes 67789134
chr5 171857865 171857879 SPIC JASPAR yes 67789135
chr5 171857865 171857879 STAT1 JASPAR yes 67789136
chr5 171857866 171857887 IRF1 JASPAR yes 67789137
chr5 171857867 171857882 FOXP1 JASPAR yes 67789138
chr5 171857867 171857888 IRF1 JASPAR yes 67789139
chr5 171857868 171857889 IRF1 JASPAR yes 67789140
chr5 171857869 171857884 FOXP1 JASPAR yes 67789141
chr5 171857871 171857886 FOXP1 JASPAR yes 67789142
chr5 171857872 171857887 FOXP1 JASPAR yes 67789143
Genes associated with rs5873323[chr5:171857872], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More