EnhancerDB
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  3. rs58813542[chr1:228965907]
Enhancers that have rs58813542[chr1:228965907]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs58813542[chr1:228965907]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228965894 228965909 HNF4G JASPAR yes 35933120
chr1 228965895 228965916 IRF1 JASPAR yes 35933121
chr1 228965897 228965912 IRF9 JASPAR yes 35933122
chr1 228965898 228965912 IRF7 JASPAR yes 35933123
chr1 228965899 228965917 IRF2 JASPAR yes 35933124
chr1 228965900 228965912 IRF1 JASPAR yes 35933125
Genes associated with rs58813542[chr1:228965907], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More