EnhancerDB
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  3. rs58854197[chr12:46550586]
Enhancers that have rs58854197[chr12:46550586]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46542685 46564475 enh14673
Skin (Keratinocyte) Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Brain (SK-N-SH) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs58854197[chr12:46550586]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46546181 46550702 ZNF274 GTRD no Cervix (HeLa-S3) 21540604
chr12 46549242 46550958 ZNF274 GTRD no Cervix (HeLa-S3) 21540670
chr12 46549399 46550814 ZBTB33 GTRD no Lung (A549) 21540671
chr12 46549402 46550594 ZNF274 GTRD no Cervix (HeLa-S3) 21540672
chr12 46549408 46550774 ZBTB33 GTRD no Lung (A549) 21540673
chr12 46549427 46551942 ZNF274 GTRD no Cervix (HeLa-S3) 21540674
chr12 46549443 46552644 ZNF274 GTRD no Cervix (HeLa-S3) 21540676
chr12 46549452 46551820 ZNF274 GTRD no Cervix (HeLa-S3) 21540677
chr12 46549467 46550906 ZNF274 GTRD no Cervix (HeLa-S3) 21540679
chr12 46549473 46550925 ZNF274 GTRD no Cervix (HeLa-S3) 21540680
chr12 46549510 46552088 ZBTB33 GTRD no Lung (A549) 21540683
chr12 46549577 46550675 ZBTB33 GTRD no Lung (A549) 21540689
chr12 46550495 46551082 ZNF274 GTRD no Cervix (HeLa-S3) 21540711
chr12 46550568 46550588 RREB1 JASPAR yes 120599272
chr12 46550568 46550589 IRF1 JASPAR yes 120599273
chr12 46550569 46550590 IRF1 JASPAR yes 120599276
chr12 46550574 46550595 IRF1 JASPAR yes 120599279
chr12 46550575 46550590 FOXP1 JASPAR yes 120599281
chr12 46550575 46550596 IRF1 JASPAR yes 120599282
chr12 46550576 46550587 FOXP2 JASPAR yes 120599283
chr12 46550576 46550588 FOXC2 JASPAR yes 120599284
chr12 46550576 46550591 STAT2 JASPAR yes 120599285
chr12 46550576 46550597 IRF1 JASPAR yes 120599286
chr12 46550577 46550592 FOXP1 JASPAR yes 120599287
chr12 46550577 46550598 IRF1 JASPAR yes 120599288
chr12 46550578 46550599 IRF1 JASPAR yes 120599289
chr12 46550579 46550594 FOXP1 JASPAR yes 120599290
chr12 46550580 46550595 FOXP1 JASPAR yes 120599291
chr12 46550581 46550596 FOXP1 JASPAR yes 120599292
chr12 46550582 46550597 FOXP1 JASPAR yes 120599293
chr12 46550583 46550598 FOXP1 JASPAR yes 120599294
chr12 46550584 46550599 FOXP1 JASPAR yes 120599295
chr12 46550585 46550600 FOXP1 JASPAR yes 120599296
Genes associated with rs58854197[chr12:46550586], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More