EnhancerDB
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  3. rs59051280[chr1:205444653]
Enhancers that have rs59051280[chr1:205444653]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205444631 205456855 enh61954
Prostate (PC-3) Cervix (HeLa-S3) Esophagus Stomach Muscle (A673) Colon (HCT116) Breast Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs59051280[chr1:205444653]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205443087 205445846 ZNF143 GTRD no Epithelial (MCF-7) 21371863
chr1 205443424 205445091 ZNF143 GTRD no Epithelial (MCF-7) 21371864
chr1 205444192 205444955 ZNF143 GTRD no Epithelial (MCF-7) 21371865
chr1 205444623 205445311 SOX2 GTRD no Neural Stem Cells (H9) 21371866
chr1 205444646 205444655 VENTX JASPAR yes 34762516
Genes associated with rs59051280[chr1:205444653], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More