EnhancerDB
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  3. rs59160039[chr1:234697259]
Enhancers that have rs59160039[chr1:234697259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234695125 234703195 enh12791
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Placenta Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs59160039[chr1:234697259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234697109 234697399 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21394559
chr1 234697126 234697386 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21394560
chr1 234697245 234697260 HNF4G JASPAR yes 36288688
chr1 234697245 234697260 NR2C2 JASPAR yes 36288689
chr1 234697246 234697260 RXRB JASPAR yes 36288690
chr1 234697246 234697260 RXRG JASPAR yes 36288691
chr1 234697246 234697261 HNF4A JASPAR yes 36288692
chr1 234697251 234697262 ESRRA JASPAR yes 36288694
Genes associated with rs59160039[chr1:234697259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More