EnhancerDB
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  3. rs59189325[chr1:233655109]
Enhancers that have rs59189325[chr1:233655109]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 233652007 233661080 enh58228
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Colon (HCT116) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs59189325[chr1:233655109]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 233653953 233657670 ZNF274 GTRD no Cervix (HeLa-S3) 21392442
chr1 233654175 233656067 TCF7L2 GTRD no Colon (HCT116) 21392446
chr1 233654215 233656521 AR GTRD no Prostate (PC-3) 21392450
chr1 233654322 233655991 ZNF274 GTRD no Cervix (HeLa-S3) 21392451
chr1 233654338 233655134 ZNF274 GTRD no Cervix (HeLa-S3) 21392452
chr1 233654355 233657292 ZNF274 GTRD no Cervix (HeLa-S3) 21392453
chr1 233654356 233655842 ZNF274 GTRD no Cervix (HeLa-S3) 21392454
chr1 233654358 233657191 ZNF274 GTRD no Cervix (HeLa-S3) 21392455
chr1 233654359 233655271 ZNF143 GTRD no Epithelial (MCF-7) 21392456
chr1 233654399 233655297 ZNF143 GTRD no Epithelial (MCF-7) 21392457
chr1 233654401 233655876 ZNF274 GTRD no Cervix (HeLa-S3) 21392458
chr1 233654414 233655792 ZNF274 GTRD no Cervix (HeLa-S3) 21392459
chr1 233654414 233655895 ZNF274 GTRD no Cervix (HeLa-S3) 21392460
chr1 233654431 233655141 ZNF274 GTRD no Cervix (HeLa-S3) 21392462
chr1 233654431 233655933 ZNF274 GTRD no Cervix (HeLa-S3) 21392463
chr1 233654442 233655250 ZNF143 GTRD no Epithelial (MCF-7) 21392464
chr1 233654447 233655885 TCF7L2 GTRD no Colon (HCT116) 21392465
chr1 233654480 233655186 ZNF274 GTRD no Cervix (HeLa-S3) 21392466
chr1 233654495 233655338 ZNF143 GTRD no Epithelial (MCF-7) 21392467
chr1 233654496 233655176 ZNF274 GTRD no Cervix (HeLa-S3) 21392468
chr1 233654498 233655356 ZNF143 GTRD no Epithelial (MCF-7) 21392469
chr1 233654501 233655145 ZNF143 GTRD no Epithelial (MCF-7) 21392470
chr1 233654510 233655829 ZNF274 GTRD no Cervix (HeLa-S3) 21392471
chr1 233654534 233655153 ZNF143 GTRD no Epithelial (MCF-7) 21392474
chr1 233654540 233655122 ZNF143 GTRD no Epithelial (MCF-7) 21392475
chr1 233654542 233655840 ZNF274 GTRD no Cervix (HeLa-S3) 21392476
chr1 233654552 233655978 ZNF274 GTRD no Cervix (HeLa-S3) 21392479
chr1 233654557 233655136 ZNF143 GTRD no Epithelial (MCF-7) 21392482
chr1 233654566 233655145 ZNF143 GTRD no Epithelial (MCF-7) 21392484
chr1 233654581 233655179 ZNF143 GTRD no Epithelial (MCF-7) 21392485
chr1 233654595 233655354 ZNF143 GTRD no Epithelial (MCF-7) 21392487
chr1 233654638 233655126 ZNF143 GTRD no Epithelial (MCF-7) 21392494
chr1 233654668 233655673 TCF7L2 GTRD no Colon (HCT116) 21392496
chr1 233654741 233655120 ZNF143 GTRD no Epithelial (MCF-7) 21392499
chr1 233655103 233655111 NR4A2 JASPAR yes 36227872
chr1 233655103 233655124 IRF1 JASPAR yes 36227873
chr1 233655104 233655125 IRF1 JASPAR yes 36227874
chr1 233655106 233655121 FOXP1 JASPAR yes 36227875
chr1 233655108 233655123 FOXP1 JASPAR yes 36227876
chr1 233655109 233655124 FOXP1 JASPAR yes 36227877
Genes associated with rs59189325[chr1:233655109], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More