EnhancerDB
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  3. rs59498328[chr1:52004135]
Enhancers that have rs59498328[chr1:52004135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 51998705 52011795 enh359
Prostate (PC-3) Cervix (HeLa-S3) Stomach Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs59498328[chr1:52004135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52004124 52004145 IRF1 JASPAR yes 28847357
chr1 52004127 52004141 STAT1 JASPAR yes 28847358
chr1 52004128 52004139 DUX4 JASPAR yes 28847359
chr1 52004128 52004142 IRF7 JASPAR yes 28847360
chr1 52004128 52004143 IRF9 JASPAR yes 28847361
chr1 52004133 52004137 YY1 TRANSFAC yes 28847362
chr1 52004134 52004149 FOXP1 JASPAR yes 28847363
Genes associated with rs59498328[chr1:52004135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More