EnhancerDB
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  3. rs595254[chr1:12228810]
Enhancers that have rs595254[chr1:12228810]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12227833 12229578 vista388
VISTA
chr1 12228245 12248275 enh11508
Bone Marrow (K562) Cervix (HeLa-S3) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Pancreas Uterus Thymus Heart
Transcript factors that have rs595254[chr1:12228810]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12226757 12228845 POLR2A UCSC Txn Factor no Conserved 107802101
chr1 12228798 12228814 GLIS1 JASPAR yes 26805363
chr1 12228798 12228814 GLIS1 JASPAR yes 118231965
chr1 12228801 12228821 RREB1 JASPAR yes 26805364
chr1 12228801 12228821 RREB1 JASPAR yes 118231966
chr1 12228809 12228823 GLIS2 JASPAR yes 26805366
chr1 12228809 12228823 GLIS2 JASPAR yes 118231968
Genes associated with rs595254[chr1:12228810], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More