EnhancerDB
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  3. rs59549029[chr2:39800563]
Enhancers that have rs59549029[chr2:39800563]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39792725 39800675 enh18471
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus Heart
chr2 39800503 39800829 vista31149
VISTA
Transcript factors that have rs59549029[chr2:39800563]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39800560 39800573 POU2F2 JASPAR yes 22039636
chr2 39800560 39800573 POU2F2 JASPAR yes 73217275
chr2 39800561 39800574 POU3F3 JASPAR yes 22039637
chr2 39800561 39800574 POU3F3 JASPAR yes 73217276
chr2 39800562 39800566 YY1 TRANSFAC yes 22039638
chr2 39800562 39800566 YY1 TRANSFAC yes 73217277
chr2 39800562 39800574 POU2F1 JASPAR yes 22039639
chr2 39800562 39800574 POU2F1 JASPAR yes 73217278
chr2 39800563 39800570 POU2F1 TRANSFAC yes 22039640
chr2 39800563 39800570 POU2F2C TRANSFAC yes 22039641
chr2 39800563 39800570 POU2F2 TRANSFAC yes 22039642
chr2 39800563 39800570 POU2F1 TRANSFAC yes 73217279
chr2 39800563 39800570 POU2F2C TRANSFAC yes 73217280
chr2 39800563 39800570 POU2F2 TRANSFAC yes 73217281
chr2 39800563 39800572 POU5F1B JASPAR yes 22039643
chr2 39800563 39800572 POU5F1B JASPAR yes 73217282
Genes associated with rs59549029[chr2:39800563], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More