EnhancerDB
  1. Home
  2. SNP
  3. rs59601541[chr18:57622661]
Enhancers that have rs59601541[chr18:57622661]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57615485 57630775 enh4882
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs59601541[chr18:57622661]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57619977 57622784 ZNF274 GTRD no Bone Marrow (K562) 108339086
chr18 57620641 57622675 ZNF274 GTRD no Blood (GM12878) 21825437
chr18 57620641 57622675 ZNF274 GTRD no Blood (GM12878) 108339090
chr18 57620818 57622811 ZNF274 GTRD no Liver (HepG2) 108339093
chr18 57620863 57622807 ZNF274 GTRD no Blood (GM12878) 21825442
chr18 57620863 57622807 ZNF274 GTRD no Blood (GM12878) 108339096
chr18 57620919 57622706 ZNF274 GTRD no Blood (GM12878) 21825450
chr18 57620919 57622706 ZNF274 GTRD no Blood (GM12878) 108339105
chr18 57620940 57622787 ZNF274 GTRD no Blood (GM12878) 21825455
chr18 57620940 57622787 ZNF274 GTRD no Blood (GM12878) 108339111
chr18 57620940 57622799 ZNF274 GTRD no Liver (HepG2) 108339112
chr18 57621063 57622902 ZNF274 GTRD no Blood (GM12878) 21825460
chr18 57621063 57622902 ZNF274 GTRD no Blood (GM12878) 108339117
chr18 57621132 57623330 TCF7L2 GTRD no Colon (HCT116) 21825465
chr18 57621132 57623330 TCF7L2 GTRD no Colon (HCT116) 108339123
chr18 57621137 57622936 TEF1 GTRD no Bone (Osteoblast) 108339124
chr18 57621203 57622694 ZNF274 GTRD no Blood (GM12878) 21825469
chr18 57621316 57622685 ZNF274 GTRD no Blood (GM12878) 21825486
chr18 57621345 57622719 ZNF274 GTRD no Blood (GM12878) 21825491
chr18 57621352 57623090 TCF7L2 GTRD no Colon (HCT116) 21825493
chr18 57621360 57622735 TCF7L2 GTRD no Colon (HCT116) 21825494
chr18 57621520 57622663 ZBTB33 GTRD no Brain (SK-N-SH) 21825545
chr18 57622656 57622662 ZNF354C JASPAR yes 111068024
Genes associated with rs59601541[chr18:57622661], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More