EnhancerDB
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Enhancers that have rs596854[chr2:224648165]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224641685 224672795 enh6172
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs596854[chr2:224648165]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224648165 224648175 ALX3 JASPAR yes 81286343
chr2 224648165 224648175 EN2 JASPAR yes 81286344
chr2 224648165 224648175 ESX1 JASPAR yes 81286345
chr2 224648165 224648175 GBX1 JASPAR yes 81286346
chr2 224648165 224648175 GBX2 JASPAR yes 81286347
chr2 224648165 224648175 GSX1 JASPAR yes 81286348
chr2 224648165 224648175 GSX2 JASPAR yes 81286349
chr2 224648165 224648175 LBX2 JASPAR yes 81286350
chr2 224648165 224648175 MIXL1 JASPAR yes 81286351
Genes associated with rs596854[chr2:224648165], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More