EnhancerDB
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  3. rs59708671[chr1:16696398]
Enhancers that have rs59708671[chr1:16696398]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16696032 16696399 vista534
VISTA
chr1 16696385 16708055 enh11547
Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs59708671[chr1:16696398]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16696201 16696906 TCF7L2 GTRD no Colon (HCT116) 21325257
chr1 16696201 16696906 TCF7L2 GTRD no Colon (HCT116) 107802234
chr1 16696378 16696399 IRF1 JASPAR yes 27042158
chr1 16696378 16696399 IRF1 JASPAR yes 118239388
chr1 16696383 16696398 FOXP1 JASPAR yes 27042161
chr1 16696383 16696398 FOXP1 JASPAR yes 118239391
Genes associated with rs59708671[chr1:16696398], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More