EnhancerDB
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  3. rs59747435[chr6:17717996]
Enhancers that have rs59747435[chr6:17717996]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17712332 17727615 enh23084
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs59747435[chr6:17717996]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17717975 17717996 IRF1 JASPAR yes 100396445
chr6 17717976 17717997 IRF1 JASPAR yes 100396447
chr6 17717977 17717998 IRF1 JASPAR yes 100396449
chr6 17717979 17718000 IRF1 JASPAR yes 100396452
chr6 17717980 17718001 IRF1 JASPAR yes 100396454
chr6 17717981 17717996 FOXP1 JASPAR yes 100396455
chr6 17717984 17717999 STAT2 JASPAR yes 100396456
chr6 17717988 17718008 RREB1 JASPAR yes 100396457
chr6 17717991 17718006 RUNX2 JASPAR yes 100396458
chr6 17717992 17718001 RUNX2 JASPAR yes 100396459
chr6 17717992 17718002 RUNX3 JASPAR yes 100396460
chr6 17717992 17718003 RUNX1 JASPAR yes 100396461
Genes associated with rs59747435[chr6:17717996], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More