EnhancerDB
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  3. rs59811099[chr1:40459468]
Enhancers that have rs59811099[chr1:40459468]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40433665 40464395 enh265
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (GM12878) Stomach Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs59811099[chr1:40459468]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40459462 40459473 HOXA10 JASPAR yes 28306463
chr1 40459462 40459473 HOXC11 JASPAR yes 28306464
chr1 40459462 40459473 HOXC12 JASPAR yes 28306465
chr1 40459462 40459473 HOXC13 JASPAR yes 28306466
chr1 40459462 40459473 HOXD12 JASPAR yes 28306467
chr1 40459463 40459472 CDX1 JASPAR yes 28306468
chr1 40459463 40459473 HOXA13 JASPAR yes 28306469
chr1 40459463 40459473 HOXC10 JASPAR yes 28306470
chr1 40459463 40459473 HOXD11 JASPAR yes 28306471
Genes associated with rs59811099[chr1:40459468], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More