EnhancerDB
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  3. rs59821259[chr6:41678021]
Enhancers that have rs59821259[chr6:41678021]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs59821259[chr6:41678021]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41678020 41678030 NEUROD2 JASPAR yes 101667764
chr6 41678020 41678031 USF1 JASPAR yes 101667765
chr6 41678020 41678031 USF2 JASPAR yes 101667766
chr6 41678020 41678032 TAL1 JASPAR yes 101667767
chr6 41678021 41678031 MAX JASPAR yes 101667768
Genes associated with rs59821259[chr6:41678021], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More