EnhancerDB
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  3. rs598229[chr1:201578981]
Enhancers that have rs598229[chr1:201578981]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs598229[chr1:201578981]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201570153 201579304 ZNF274 GTRD no Bone Marrow (K562) 107856725
chr1 201578970 201578982 MEF2A JASPAR yes 34513111
chr1 201578970 201578982 MEF2B JASPAR yes 34513112
chr1 201578970 201578982 MEF2D JASPAR yes 34513113
chr1 201578971 201578981 MEF2A JASPAR yes 34513114
chr1 201578976 201578997 ZNF263 JASPAR yes 34513116
chr1 201578978 201578999 ZNF263 JASPAR yes 34513117
chr1 201578979 201578994 PRDM1 JASPAR yes 34513118
chr1 201578979 201579000 ZNF263 JASPAR yes 34513119
chr1 201578980 201579001 ZNF263 JASPAR yes 34513120
Genes associated with rs598229[chr1:201578981], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More