EnhancerDB
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  3. rs59951593[chr19:1213492]
Enhancers that have rs59951593[chr19:1213492]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 1201505 1220340 enh17841
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Uterus Thymus Heart
Transcript factors that have rs59951593[chr19:1213492]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 1213167 1215783 ZNF274 GTRD no Blood (GM12878) 108351407
chr19 1213167 1215783 ZNF274 GTRD no Blood (GM12878) 108351408
chr19 1213178 1214911 ZNF274 GTRD no Blood (GM12878) 108351409
chr19 1213184 1214331 AR GTRD no Prostate (PC-3) 108351410
chr19 1213187 1214624 ZNF274 GTRD no Blood (GM12878) 108351411
chr19 1213199 1214768 ZNF274 GTRD no Blood (GM12878) 108351412
chr19 1213276 1215146 ZNF274 GTRD no Blood (GM12878) 108351413
chr19 1213276 1215146 ZNF274 GTRD no Blood (GM12878) 108351414
chr19 1213277 1214160 ZNF274 GTRD no Blood (GM12878) 108351415
chr19 1213282 1214434 ZNF274 GTRD no Blood (GM12878) 108351416
chr19 1213350 1215969 TCF7L2 GTRD no Colon (HCT116) 21831910
chr19 1213350 1215969 TCF7L2 GTRD no Colon (HCT116) 108351417
chr19 1213350 1215969 TCF7L2 GTRD no Colon (HCT116) 108351418
chr19 1213356 1214642 ZNF274 GTRD no Bone Marrow (K562) 21831911
chr19 1213356 1214642 ZNF274 GTRD no Bone Marrow (K562) 108351419
chr19 1213359 1214762 ZNF274 GTRD no Blood (GM12878) 108351420
chr19 1213361 1214082 ZNF143 GTRD no Epithelial (MCF-7) 108351421
chr19 1213365 1215040 TCF7L2 GTRD no Colon (HCT116) 21831912
chr19 1213365 1215040 TCF7L2 GTRD no Colon (HCT116) 108351422
chr19 1213365 1215040 TCF7L2 GTRD no Colon (HCT116) 108351423
chr19 1213389 1215923 TCF7L2 GTRD no Colon (HCT116) 21831913
chr19 1213389 1215923 TCF7L2 GTRD no Colon (HCT116) 108351424
chr19 1213389 1215923 TCF7L2 GTRD no Colon (HCT116) 108351425
chr19 1213401 1214665 ZNF274 GTRD no Blood (GM12878) 108351426
chr19 1213406 1213888 TCF7L2 GTRD no Colon (HCT116) 21831914
chr19 1213406 1213888 TCF7L2 GTRD no Colon (HCT116) 108351427
chr19 1213417 1214329 ZBTB33 GTRD no Brain (SK-N-SH) 21831915
chr19 1213417 1214329 ZBTB33 GTRD no Brain (SK-N-SH) 108351428
Genes associated with rs59951593[chr19:1213492], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr19 1905213 1926016 + SCAMP4 ENSG00000227500.5 1905213 691721 Thyroid 0.00210837 16765