EnhancerDB
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  3. rs60200228[chr3:11580348]
Enhancers that have rs60200228[chr3:11580348]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 11569249 11608890 enh7001
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Pancreas (Panc1) Blood (Karpas-422) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs60200228[chr3:11580348]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 11580346 11580367 IRF1 JASPAR yes 428113
chr3 11580347 11580362 FOXP1 JASPAR yes 428114
chr3 11580348 11580369 IRF1 JASPAR yes 428115
Genes associated with rs60200228[chr3:11580348], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More