EnhancerDB
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  3. rs60237853[chr1:228975584]
Enhancers that have rs60237853[chr1:228975584]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228960005 228980255 enh12752
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Kidney Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Cervix (HeLa-S3) Stomach Placenta Colon (HCT116) Breast Thyroid Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Heart
Transcript factors that have rs60237853[chr1:228975584]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228975052 228976030 AR GTRD no Prostate (PC-3) 21388929
chr1 228975283 228975857 TCF7L2 GTRD no Colon (HCT116) 21388930
chr1 228975578 228975595 PAX1 JASPAR yes 35934474
chr1 228975578 228975595 PAX9 JASPAR yes 35934475
chr1 228975579 228975593 PAX6 JASPAR yes 35934476
Genes associated with rs60237853[chr1:228975584], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More