EnhancerDB
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Enhancers that have rs602554[chr18:53178475]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 53162865 53184715 enh4857
Esophagus Blood (OCI-LY7) Muscle (A673) Uterus Blood (Karpas-422) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Heart
Transcript factors that have rs602554[chr18:53178475]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 53176867 53178500 POLR2A UCSC Txn Factor no Conserved 108337488
chr18 53178457 53178478 IRF1 JASPAR yes 110781832
chr18 53178461 53178475 SPI1 JASPAR yes 110781834
chr18 53178461 53178475 SPIC JASPAR yes 110781835
chr18 53178462 53178475 ELF1 JASPAR yes 110781836
chr18 53178463 53178475 EHF JASPAR yes 110781839
chr18 53178463 53178475 ELF1 JASPAR yes 110781840
chr18 53178463 53178475 ELF4 JASPAR yes 110781841
chr18 53178463 53178476 ELF3 JASPAR yes 110781842
chr18 53178464 53178475 ELF5 JASPAR yes 110781843
chr18 53178464 53178475 ETV2 JASPAR yes 110781844
chr18 53178464 53178475 SPDEF JASPAR yes 110781845
chr18 53178465 53178475 ELK1 JASPAR yes 110781847
chr18 53178465 53178475 ELK3 JASPAR yes 110781848
chr18 53178465 53178475 ERF JASPAR yes 110781849
chr18 53178465 53178475 ERG JASPAR yes 110781850
chr18 53178465 53178475 ETS1 JASPAR yes 110781851
chr18 53178465 53178475 ETV1 JASPAR yes 110781852
chr18 53178465 53178475 ETV3 JASPAR yes 110781853
chr18 53178465 53178475 ETV4 JASPAR yes 110781854
chr18 53178465 53178475 ETV5 JASPAR yes 110781855
chr18 53178465 53178475 ETV6 JASPAR yes 110781856
chr18 53178465 53178475 FEV JASPAR yes 110781857
chr18 53178465 53178475 FLI1 JASPAR yes 110781858
chr18 53178465 53178476 ELK4 JASPAR yes 110781859
chr18 53178465 53178476 FLI1 JASPAR yes 110781860
Genes associated with rs602554[chr18:53178475], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More