EnhancerDB
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  3. rs60274708[chr2:28583380]
Enhancers that have rs60274708[chr2:28583380]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28576025 28608635 enh18385
Bone Marrow (K562) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr2 28583371 28583537 vista30825
VISTA
Transcript factors that have rs60274708[chr2:28583380]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28583257 28583591 TFAP2C UCSC Txn Factor no Conserved 108431605
chr2 28583298 28583571 TFAP2A UCSC Txn Factor no Conserved 108431606
chr2 28583368 28583383 TFAP2A JASPAR yes 22024550
chr2 28583368 28583383 TFAP2C JASPAR yes 22024551
chr2 28583368 28583383 TFAP2A JASPAR yes 72641831
chr2 28583368 28583383 TFAP2C JASPAR yes 72641832
chr2 28583371 28583382 TFAP2A JASPAR yes 22024552
chr2 28583371 28583382 TFAP2B JASPAR yes 22024553
chr2 28583371 28583382 TFAP2C JASPAR yes 22024554
chr2 28583371 28583382 TFAP2A JASPAR yes 72641833
chr2 28583371 28583382 TFAP2B JASPAR yes 72641834
chr2 28583371 28583382 TFAP2C JASPAR yes 72641835
chr2 28583371 28583383 TFAP2A JASPAR yes 22024555
chr2 28583371 28583383 TFAP2B JASPAR yes 22024556
chr2 28583371 28583383 TFAP2C JASPAR yes 22024557
chr2 28583371 28583383 TFAP2A JASPAR yes 72641836
chr2 28583371 28583383 TFAP2B JASPAR yes 72641837
chr2 28583371 28583383 TFAP2C JASPAR yes 72641838
chr2 28583379 28583384 SP1 TRANSFAC yes 22024558
chr2 28583379 28583384 SP1 TRANSFAC yes 72641839
Genes associated with rs60274708[chr2:28583380], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More