EnhancerDB
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  3. rs60420513[chr16:88263511]
Enhancers that have rs60420513[chr16:88263511]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88258045 88283355 enh32027
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Lung (PC-9) Bone (Osteoblast) Stomach Colon (HCT116) Brain (SK-N-SH) Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus Heart
Transcript factors that have rs60420513[chr16:88263511]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88262812 88264212 TCF7L2 GTRD no Colon (HCT116) 21735441
chr16 88262863 88265383 TCF7L2 GTRD no Colon (HCT116) 21735442
chr16 88262956 88263693 TCF7L2 GTRD no Colon (HCT116) 21735443
chr16 88263317 88266497 TCF7L2 GTRD no Colon (HCT116) 21735446
chr16 88263317 88266497 TCF7L2 GTRD no Colon (HCT116) 108221839
chr16 88263500 88263511 ESRRA JASPAR yes 12268184
chr16 88263504 88263518 TLX1 JASPAR yes 12268186
chr16 88263510 88263515 SP1 TRANSFAC yes 12268187
Genes associated with rs60420513[chr16:88263511], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More