EnhancerDB
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  3. rs60442837[chr6:41696299]
Enhancers that have rs60442837[chr6:41696299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41672005 41699742 enh9103
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr6 41696174 41696539 vista51932
VISTA
Transcript factors that have rs60442837[chr6:41696299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41696298 41696310 HES7 JASPAR yes 70363315
chr6 41696298 41696310 HES7 JASPAR yes 101669994
chr6 41696299 41696308 SNAI2 JASPAR yes 70363316
chr6 41696299 41696308 SNAI2 JASPAR yes 101669995
chr6 41696299 41696309 ID4 JASPAR yes 70363317
chr6 41696299 41696309 NHLH1 JASPAR yes 70363318
chr6 41696299 41696309 TCF3 JASPAR yes 70363319
chr6 41696299 41696309 TCF4 JASPAR yes 70363320
chr6 41696299 41696309 ID4 JASPAR yes 101669996
chr6 41696299 41696309 NHLH1 JASPAR yes 101669997
chr6 41696299 41696309 TCF3 JASPAR yes 101669998
chr6 41696299 41696309 TCF4 JASPAR yes 101669999
Genes associated with rs60442837[chr6:41696299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More