EnhancerDB
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  3. rs60491799[chr1:41960190]
Enhancers that have rs60491799[chr1:41960190]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41956025 41971975 enh11789
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Muscle (A673) Heart
Transcript factors that have rs60491799[chr1:41960190]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41960171 41960190 REST JASPAR yes 28395196
chr1 41960188 41960197 HIC2 JASPAR yes 28395199
chr1 41960189 41960203 TLX1 JASPAR yes 28395200
chr1 41960190 41960202 HES5 JASPAR yes 28395201
chr1 41960190 41960202 HES7 JASPAR yes 28395202
Genes associated with rs60491799[chr1:41960190], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More