EnhancerDB
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  3. rs60522840[chr16:386550]
Enhancers that have rs60522840[chr16:386550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs60522840[chr16:386550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 386542 386552 SP1 JASPAR yes 9106513
chr16 386550 386563 SMAD2 JASPAR yes 9106514
Genes associated with rs60522840[chr16:386550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 417384 420527 - MRPL28 ENSG00000086504.11 420527 30834 Stomach 0.137186 14343