EnhancerDB
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  3. rs60549462[chr19:3379995]
Enhancers that have rs60549462[chr19:3379995]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3362205 3392371 enh17862
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Cervix (HeLa-S3) Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs60549462[chr19:3379995]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3379984 3380005 IRF1 JASPAR yes 112125729
chr19 3379988 3380008 RREB1 JASPAR yes 112125730
chr19 3379988 3380009 IRF1 JASPAR yes 112125731
chr19 3379990 3380005 FOXP1 JASPAR yes 112125732
chr19 3379993 3380013 RREB1 JASPAR yes 112125733
chr19 3379994 3380015 IRF1 JASPAR yes 112125734
chr19 3379995 3380001 TCF4 TRANSFAC yes 112125735
chr19 3379995 3380010 FOXP1 JASPAR yes 112125736
Genes associated with rs60549462[chr19:3379995], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More