EnhancerDB
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  3. rs606656[chr3:124865063]
Enhancers that have rs606656[chr3:124865063]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124842678 124871615 enh7502
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs606656[chr3:124865063]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124865042 124865063 IRF1 JASPAR yes 5429254
chr3 124865061 124865069 GATA3 JASPAR yes 5429262
chr3 124865061 124865069 GATA5 JASPAR yes 5429263
chr3 124865062 124865076 SPI1 JASPAR yes 5429264
Genes associated with rs606656[chr3:124865063], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 125165495 125239041 - SNX4 ENSG00000114520.6 125239041 300432 Esophagus 0.0386213 4026