EnhancerDB
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  3. rs608280[chr1:201560104]
Enhancers that have rs608280[chr1:201560104]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201559168 201580562 enh12524
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Placenta Breast Thyroid Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Pancreas Uterus Heart
Transcript factors that have rs608280[chr1:201560104]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201558404 201560160 ZNF143 GTRD no Epithelial (MCF-7) 21365040
chr1 201558868 201560322 ZNF143 GTRD no Epithelial (MCF-7) 21365041
chr1 201558893 201560700 ZNF143 GTRD no Epithelial (MCF-7) 21365042
chr1 201558961 201560330 ZNF143 GTRD no Epithelial (MCF-7) 21365043
chr1 201558992 201560675 ZNF274 GTRD no Cervix (HeLa-S3) 21365044
chr1 201559075 201560429 ZNF274 GTRD no Cervix (HeLa-S3) 21365045
chr1 201559084 201560164 ZNF143 GTRD no Epithelial (MCF-7) 21365046
chr1 201559098 201560118 ZNF143 GTRD no Epithelial (MCF-7) 21365047
chr1 201559177 201560290 ZNF143 GTRD no Epithelial (MCF-7) 21365048
chr1 201559209 201560155 ZNF143 GTRD no Epithelial (MCF-7) 21365049
chr1 201559232 201560944 ZNF143 GTRD no Epithelial (MCF-7) 21365050
chr1 201559258 201560321 ZNF143 GTRD no Epithelial (MCF-7) 21365051
chr1 201559261 201560235 ZNF143 GTRD no Epithelial (MCF-7) 21365052
chr1 201559265 201560313 ZNF143 GTRD no Epithelial (MCF-7) 21365053
chr1 201559269 201560163 ZNF143 GTRD no Epithelial (MCF-7) 21365054
chr1 201559289 201560268 ZNF143 GTRD no Epithelial (MCF-7) 21365055
chr1 201559291 201560180 ZBTB33 GTRD no Brain (SK-N-SH) 21365056
chr1 201559299 201560136 ZNF143 GTRD no Epithelial (MCF-7) 21365057
chr1 201559310 201561209 ZNF143 GTRD no Epithelial (MCF-7) 21365058
chr1 201559369 201560146 ZBTB33 GTRD no Brain (SK-N-SH) 21365059
chr1 201559441 201560120 ZNF274 GTRD no Cervix (HeLa-S3) 21365060
chr1 201559461 201560240 ZNF274 GTRD no Cervix (HeLa-S3) 21365062
chr1 201559471 201560128 ZNF274 GTRD no Cervix (HeLa-S3) 21365063
chr1 201559527 201560167 ZBTB33 GTRD no Brain (SK-N-SH) 21365065
chr1 201559530 201560117 ZNF274 GTRD no Cervix (HeLa-S3) 21365066
chr1 201559548 201560146 ZNF274 GTRD no Cervix (HeLa-S3) 21365067
chr1 201559613 201560186 ZNF274 GTRD no Cervix (HeLa-S3) 21365068
chr1 201559690 201560178 ZBTB33 GTRD no Brain (SK-N-SH) 21365069
chr1 201560103 201560110 NKX3-1 JASPAR yes 34510574
chr1 201560104 201560112 FOXC1 JASPAR yes 34510575
Genes associated with rs608280[chr1:201560104], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More