EnhancerDB
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  3. rs60942980[chr19:3176802]
Enhancers that have rs60942980[chr19:3176802]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3170105 3178875 enh17860
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Breast Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs60942980[chr19:3176802]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3175622 3177729 ZNF274 GTRD no Cervix (HeLa-S3) 21838666
chr19 3175622 3177729 ZNF274 GTRD no Cervix (HeLa-S3) 108365292
chr19 3175642 3177810 ZNF274 GTRD no Cervix (HeLa-S3) 21838667
chr19 3175642 3177810 ZNF274 GTRD no Cervix (HeLa-S3) 108365293
chr19 3175698 3177785 ZNF274 GTRD no Blood (GM12878) 108365294
chr19 3175714 3177730 ZNF274 GTRD no Blood (GM12878) 108365295
chr19 3175716 3177551 ZNF274 GTRD no Blood (GM12878) 108365296
chr19 3175718 3177819 ZNF274 GTRD no Cervix (HeLa-S3) 21838668
chr19 3175718 3177819 ZNF274 GTRD no Cervix (HeLa-S3) 108365297
chr19 3175804 3177605 ZNF274 GTRD no Blood (GM12878) 108365298
chr19 3175834 3177750 ZBTB33 GTRD no Lung (A549) 108365299
chr19 3175896 3177545 ZNF274 GTRD no Blood (GM12878) 108365300
chr19 3175914 3177622 ZNF274 GTRD no Cervix (HeLa-S3) 21838669
chr19 3175914 3177622 ZNF274 GTRD no Cervix (HeLa-S3) 108365301
chr19 3175964 3177661 ZNF274 GTRD no Blood (GM12878) 108365302
chr19 3176145 3177683 ZNF274 GTRD no Cervix (HeLa-S3) 21838670
chr19 3176145 3177683 ZNF274 GTRD no Cervix (HeLa-S3) 108365303
chr19 3176200 3177777 TCF7L2 GTRD no Colon (HCT116) 21838671
chr19 3176200 3177777 TCF7L2 GTRD no Colon (HCT116) 108365304
chr19 3176203 3177668 TCF7L2 GTRD no Colon (HCT116) 21838672
chr19 3176203 3177668 TCF7L2 GTRD no Colon (HCT116) 108365305
chr19 3176248 3177723 ZNF274 GTRD no Bone Marrow (K562) 108365306
chr19 3176271 3177775 TCF7L2 GTRD no Colon (HCT116) 21838673
chr19 3176271 3177775 TCF7L2 GTRD no Colon (HCT116) 108365307
chr19 3176342 3177477 ZNF143 GTRD no Epithelial (MCF-7) 21838674
chr19 3176342 3177477 ZNF143 GTRD no Epithelial (MCF-7) 108365308
chr19 3176372 3177759 TCF7L2 GTRD no Colon (HCT116) 21838675
chr19 3176372 3177759 TCF7L2 GTRD no Colon (HCT116) 108365309
chr19 3176379 3177598 TCF7L2 GTRD no Colon (HCT116) 21838676
chr19 3176379 3177598 TCF7L2 GTRD no Colon (HCT116) 108365310
chr19 3176437 3177548 ZBTB33 GTRD no Lung (A549) 108365311
chr19 3176447 3177621 TCF7L2 GTRD no Colon (HCT116) 21838677
chr19 3176447 3177621 TCF7L2 GTRD no Colon (HCT116) 108365312
chr19 3176562 3177593 ZNF143 GTRD no Epithelial (MCF-7) 21838678
chr19 3176562 3177593 ZNF143 GTRD no Epithelial (MCF-7) 108365313
chr19 3176592 3177743 ZNF274 GTRD no Bone Marrow (K562) 108365314
chr19 3176652 3177699 ZBTB33 GTRD no Lung (A549) 108365315
chr19 3176672 3177557 ZNF274 GTRD no Bone Marrow (K562) 108365316
chr19 3176782 3176802 TP63 JASPAR yes 112115410
chr19 3176784 3176804 TP53 JASPAR yes 112115414
chr19 3176788 3177597 ZNF143 GTRD no Epithelial (MCF-7) 21838679
chr19 3176788 3177597 ZNF143 GTRD no Epithelial (MCF-7) 108365317
chr19 3176795 3177680 P63 GTRD no Skin (Keratinocyte) 108365318
chr19 3176796 3177572 ZNF274 GTRD no Liver (HepG2) 108365319
chr19 3176799 3177536 ZBTB33 GTRD no Lung (A549) 108365320
chr19 3176800 3177789 ZBTB33 GTRD no Lung (A549) 108365321
chr19 3176801 3176816 TFAP2C JASPAR yes 112115416
Genes associated with rs60942980[chr19:3176802], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More