EnhancerDB
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  3. rs60971009[chr1:202056430]
Enhancers that have rs60971009[chr1:202056430]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
chr1 202056138 202056515 vista4597
VISTA
Transcript factors that have rs60971009[chr1:202056430]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 21366717
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857734
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857735
chr1 202054306 202059425 ZNF143 GTRD no Epithelial (MCF-7) 107857736
chr1 202054606 202059238 ZNF143 GTRD no Epithelial (MCF-7) 21366731
chr1 202054606 202059238 ZNF143 GTRD no Epithelial (MCF-7) 107857746
chr1 202054606 202059238 ZNF143 GTRD no Epithelial (MCF-7) 107857747
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 21366733
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 107857749
chr1 202054632 202059614 ZNF143 GTRD no Epithelial (MCF-7) 107857750
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 21366737
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 107857753
chr1 202054808 202059475 ZNF143 GTRD no Epithelial (MCF-7) 107857754
chr1 202054841 202056490 TCF7L2 GTRD no Colon (HCT116) 21366738
chr1 202054841 202056490 TCF7L2 GTRD no Colon (HCT116) 107857755
chr1 202054841 202056490 TCF7L2 GTRD no Colon (HCT116) 107857756
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 21366741
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 107857760
chr1 202054946 202060519 ZNF143 GTRD no Epithelial (MCF-7) 107857761
chr1 202055108 202060026 ZNF143 GTRD no Epithelial (MCF-7) 21366754
chr1 202055108 202060026 ZNF143 GTRD no Epithelial (MCF-7) 107857776
chr1 202055108 202060026 ZNF143 GTRD no Epithelial (MCF-7) 107857777
chr1 202055378 202059488 ZNF143 GTRD no Epithelial (MCF-7) 21366770
chr1 202055378 202059488 ZNF143 GTRD no Epithelial (MCF-7) 107857794
chr1 202055378 202059488 ZNF143 GTRD no Epithelial (MCF-7) 107857795
chr1 202055397 202059453 ZNF143 GTRD no Epithelial (MCF-7) 21366771
chr1 202055397 202059453 ZNF143 GTRD no Epithelial (MCF-7) 107857796
chr1 202055397 202059453 ZNF143 GTRD no Epithelial (MCF-7) 107857797
chr1 202055496 202059164 ZNF143 GTRD no Epithelial (MCF-7) 21366773
chr1 202055496 202059164 ZNF143 GTRD no Epithelial (MCF-7) 107857798
chr1 202055526 202059175 ZBTB33 GTRD no Lung (A549) 107857799
chr1 202055558 202057718 ZNF143 GTRD no Epithelial (MCF-7) 21366775
chr1 202055558 202057718 ZNF143 GTRD no Epithelial (MCF-7) 107857800
chr1 202055581 202059404 ZNF143 GTRD no Epithelial (MCF-7) 21366777
chr1 202055581 202059404 ZNF143 GTRD no Epithelial (MCF-7) 107857802
chr1 202055596 202059238 ZNF143 GTRD no Epithelial (MCF-7) 21366779
chr1 202055596 202059238 ZNF143 GTRD no Epithelial (MCF-7) 107857803
chr1 202055618 202059392 ZNF143 GTRD no Epithelial (MCF-7) 21366780
chr1 202055618 202059392 ZNF143 GTRD no Epithelial (MCF-7) 107857805
chr1 202055694 202057533 ZNF274 GTRD no Cervix (HeLa-S3) 21366781
chr1 202055694 202057533 ZNF274 GTRD no Cervix (HeLa-S3) 107857806
chr1 202055696 202057531 ZNF143 GTRD no Epithelial (MCF-7) 21366782
chr1 202055696 202057531 ZNF143 GTRD no Epithelial (MCF-7) 107857807
chr1 202055707 202059089 ZNF143 GTRD no Epithelial (MCF-7) 21366783
chr1 202055707 202059089 ZNF143 GTRD no Epithelial (MCF-7) 107857808
chr1 202055718 202056456 ZBTB33 GTRD no Lung (A549) 107857810
chr1 202055723 202059518 ZBTB33 GTRD no Lung (A549) 107857811
chr1 202055756 202057580 ZNF274 GTRD no Liver (HepG2) 21366786
chr1 202055756 202057580 ZNF274 GTRD no Liver (HepG2) 107857813
chr1 202055774 202059322 ZBTB33 GTRD no Lung (A549) 107857815
chr1 202055779 202056439 ZNF274 GTRD no Bone Marrow (K562) 21366787
chr1 202055779 202056439 ZNF274 GTRD no Bone Marrow (K562) 107857816
chr1 202055806 202057863 ZBTB33 GTRD no Lung (A549) 107857817
chr1 202055838 202059238 ZNF274 GTRD no Cervix (HeLa-S3) 21366790
chr1 202055838 202059238 ZNF274 GTRD no Cervix (HeLa-S3) 107857820
chr1 202055880 202057585 ZBTB33 GTRD no Lung (A549) 107857822
chr1 202055930 202057734 ZBTB33 GTRD no Lung (A549) 107857828
chr1 202055938 202057611 ZNF274 GTRD no Cervix (HeLa-S3) 21366795
chr1 202055938 202057611 ZNF274 GTRD no Cervix (HeLa-S3) 107857829
chr1 202055956 202056526 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21366799
chr1 202055956 202056526 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857833
chr1 202055981 202059502 ZBTB33 GTRD no Lung (A549) 107857835
chr1 202056103 202056567 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21366802
chr1 202056103 202056567 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107857839
chr1 202056151 202056535 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21366803
chr1 202056151 202056535 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857840
chr1 202056214 202057651 P63 GTRD no Skin (Keratinocyte) 107857842
chr1 202056230 202059570 ZNF143 GTRD no Epithelial (MCF-7) 21366805
chr1 202056230 202059570 ZNF143 GTRD no Epithelial (MCF-7) 107857843
chr1 202056254 202057345 P63 GTRD no Skin (Keratinocyte) 107857844
chr1 202056259 202059472 ZNF143 GTRD no Epithelial (MCF-7) 21366806
chr1 202056259 202059472 ZNF143 GTRD no Epithelial (MCF-7) 107857845
chr1 202056261 202057359 P63 GTRD no Skin (Keratinocyte) 107857846
chr1 202056261 202059174 ZNF143 GTRD no Epithelial (MCF-7) 21366807
chr1 202056261 202059174 ZNF143 GTRD no Epithelial (MCF-7) 107857847
chr1 202056272 202059172 ZNF143 GTRD no Epithelial (MCF-7) 21366808
chr1 202056272 202059172 ZNF143 GTRD no Epithelial (MCF-7) 107857848
chr1 202056278 202056468 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21366809
chr1 202056278 202056468 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107857849
chr1 202056285 202057728 TCF7L2 GTRD no Colon (HCT116) 21366810
chr1 202056285 202057728 TCF7L2 GTRD no Colon (HCT116) 107857850
chr1 202056320 202057464 P63 GTRD no Skin (Keratinocyte) 107857851
chr1 202056323 202056954 TCF7L2 GTRD no Colon (HCT116) 21366811
chr1 202056323 202056954 TCF7L2 GTRD no Colon (HCT116) 107857852
chr1 202056323 202057877 TCF7L2 GTRD no Colon (HCT116) 21366812
chr1 202056323 202057877 TCF7L2 GTRD no Colon (HCT116) 107857853
chr1 202056326 202059295 ZNF143 GTRD no Epithelial (MCF-7) 21366813
chr1 202056326 202059295 ZNF143 GTRD no Epithelial (MCF-7) 107857854
chr1 202056330 202059256 ZNF143 GTRD no Epithelial (MCF-7) 21366814
chr1 202056330 202059256 ZNF143 GTRD no Epithelial (MCF-7) 107857855
chr1 202056343 202059375 ZNF143 GTRD no Epithelial (MCF-7) 21366815
chr1 202056343 202059375 ZNF143 GTRD no Epithelial (MCF-7) 107857856
chr1 202056354 202059296 ZNF274 GTRD no Cervix (HeLa-S3) 21366816
chr1 202056354 202059296 ZNF274 GTRD no Cervix (HeLa-S3) 107857857
chr1 202056358 202059481 ZNF274 GTRD no Cervix (HeLa-S3) 21366817
chr1 202056358 202059481 ZNF274 GTRD no Cervix (HeLa-S3) 107857858
chr1 202056377 202059551 ZNF143 GTRD no Epithelial (MCF-7) 21366818
chr1 202056377 202059551 ZNF143 GTRD no Epithelial (MCF-7) 107857859
chr1 202056381 202057858 ZNF143 GTRD no Epithelial (MCF-7) 21366819
chr1 202056381 202057858 ZNF143 GTRD no Epithelial (MCF-7) 107857860
chr1 202056393 202057551 ZNF274 GTRD no Liver (HepG2) 21366820
chr1 202056393 202057551 ZNF274 GTRD no Liver (HepG2) 107857861
chr1 202056396 202059248 ZBTB33 GTRD no Lung (A549) 107857862
chr1 202056400 202059295 ZNF143 GTRD no Epithelial (MCF-7) 21366821
chr1 202056400 202059295 ZNF143 GTRD no Epithelial (MCF-7) 107857863
chr1 202056407 202057643 ZBTB33 GTRD no Lung (A549) 107857864
chr1 202056410 202057690 TCF7L2 GTRD no Colon (HCT116) 21366822
chr1 202056410 202057690 TCF7L2 GTRD no Colon (HCT116) 107857865
chr1 202056411 202057557 ZNF274 GTRD no Cervix (HeLa-S3) 21366823
chr1 202056411 202057557 ZNF274 GTRD no Cervix (HeLa-S3) 107857866
chr1 202056411 202057685 ZNF143 GTRD no Epithelial (MCF-7) 21366824
chr1 202056411 202057685 ZNF143 GTRD no Epithelial (MCF-7) 107857867
chr1 202056414 202057486 ZBTB33 GTRD no Lung (A549) 107857868
chr1 202056414 202057793 ZNF143 GTRD no Epithelial (MCF-7) 21366825
chr1 202056414 202057793 ZNF143 GTRD no Epithelial (MCF-7) 107857869
chr1 202056415 202056436 ZNF263 JASPAR yes 34551792
chr1 202056415 202056436 ZNF263 JASPAR yes 118433999
chr1 202056421 202056432 E2F6 JASPAR yes 34551797
chr1 202056421 202056432 E2F6 JASPAR yes 118434004
chr1 202056422 202057749 ZNF143 GTRD no Epithelial (MCF-7) 21366826
chr1 202056422 202057749 ZNF143 GTRD no Epithelial (MCF-7) 107857870
chr1 202056423 202056431 SP1 TRANSFAC yes 34551798
chr1 202056423 202056431 SP1 TRANSFAC yes 118434005
chr1 202056424 202057345 ZNF274 GTRD no Cervix (HeLa-S3) 21366827
chr1 202056424 202057345 ZNF274 GTRD no Cervix (HeLa-S3) 107857871
chr1 202056425 202056431 MAZ TRANSFAC yes 34551799
chr1 202056425 202056431 MAZ TRANSFAC yes 118434006
chr1 202056429 202056439 NFKB1 JASPAR yes 34551800
chr1 202056429 202056439 NFKB1 JASPAR yes 118434007
chr1 202056430 202057637 TCF7L2 GTRD no Colon (HCT116) 21366828
chr1 202056430 202057637 TCF7L2 GTRD no Colon (HCT116) 107857872
chr1 202056430 202057689 ZBTB33 GTRD no Lung (A549) 107857873
Genes associated with rs60971009[chr1:202056430], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More