EnhancerDB
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Enhancers that have rs61098036[chr17:53509585]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 53505736 53535115 enh4475
Brain (SK-N-MC) Liver Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs61098036[chr17:53509585]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 53509573 53509588 FOXP1 JASPAR yes 54849607
chr17 53509573 53509594 IRF1 JASPAR yes 54849608
chr17 53509574 53509589 FOXP1 JASPAR yes 54849609
chr17 53509574 53509595 IRF1 JASPAR yes 54849610
chr17 53509575 53509590 FOXP1 JASPAR yes 54849611
chr17 53509575 53509596 IRF1 JASPAR yes 54849612
chr17 53509576 53509591 FOXP1 JASPAR yes 54849613
chr17 53509578 53509593 FOXP1 JASPAR yes 54849614
chr17 53509579 53509600 IRF1 JASPAR yes 54849615
chr17 53509580 53509595 FOXP1 JASPAR yes 54849616
chr17 53509580 53509601 IRF1 JASPAR yes 54849617
chr17 53509581 53509602 IRF1 JASPAR yes 54849618
chr17 53509585 53509600 FOXP1 JASPAR yes 54849619
chr17 53509585 53509606 IRF1 JASPAR yes 54849620
Genes associated with rs61098036[chr17:53509585], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More