EnhancerDB
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  3. rs61250025[chr1:23918427]
Enhancers that have rs61250025[chr1:23918427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr1 23918101 23918449 vista753
VISTA
Transcript factors that have rs61250025[chr1:23918427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23917962 23918482 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802431
chr1 23918424 23918439 TFAP2A JASPAR yes 27444635
chr1 23918424 23918439 TFAP2C JASPAR yes 27444636
chr1 23918424 23918439 TFAP2A JASPAR yes 118249983
chr1 23918424 23918439 TFAP2C JASPAR yes 118249984
chr1 23918427 23918438 TFAP2A JASPAR yes 27444637
chr1 23918427 23918438 TFAP2B JASPAR yes 27444638
chr1 23918427 23918438 TFAP2A JASPAR yes 118249985
chr1 23918427 23918438 TFAP2B JASPAR yes 118249986
Genes associated with rs61250025[chr1:23918427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More