EnhancerDB
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  3. rs61476017[chr17:46570251]
Enhancers that have rs61476017[chr17:46570251]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs61476017[chr17:46570251]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46569774 46570261 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21767739
chr17 46569774 46570276 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21767740
chr17 46569801 46570265 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21767741
chr17 46569805 46570275 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21767742
chr17 46569819 46570255 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21767745
chr17 46569822 46570258 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767746
chr17 46569838 46570414 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21767748
chr17 46569849 46570345 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767749
chr17 46569856 46570312 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767752
chr17 46569954 46570410 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767778
chr17 46570000 46570336 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767781
chr17 46570067 46570563 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767782
chr17 46570091 46570491 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21767783
chr17 46570251 46570255 LFA1 TRANSFAC yes 54589681
Genes associated with rs61476017[chr17:46570251], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More