EnhancerDB
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  3. rs61828389[chr1:172890309]
Enhancers that have rs61828389[chr1:172890309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs61828389[chr1:172890309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172890291 172890312 IRF1 JASPAR yes 33166672
chr1 172890295 172890310 PRDM1 JASPAR yes 33166674
chr1 172890304 172890314 GABPA JASPAR yes 33166675
chr1 172890305 172890310 ETS2 TRANSFAC yes 33166676
Genes associated with rs61828389[chr1:172890309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More