EnhancerDB
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  3. rs61936625[chr12:92933966]
Enhancers that have rs61936625[chr12:92933966]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 92931041 92959835 enh14884
Liver Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
chr12 92933886 92934489 vista14418
VISTA
Transcript factors that have rs61936625[chr12:92933966]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 92933527 92933973 SOX2 GTRD no Neural Stem Cells (H9) 108050318
chr12 92933700 92933978 SOX2 GTRD no Neural Stem Cells (H9) 108050319
chr12 92933839 92934077 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21562585
chr12 92933839 92934077 EBF1 UCSC Txn Factor no Conserved 108050320
chr12 92933839 92934077 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108050321
chr12 92933879 92934259 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21562586
chr12 92933879 92934259 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108050322
chr12 92933929 92934048 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21562587
chr12 92933929 92934048 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108050323
chr12 92933963 92933974 HOXC11 JASPAR yes 82453564
chr12 92933963 92933974 HOXC12 JASPAR yes 82453565
chr12 92933963 92933974 HOXC13 JASPAR yes 82453566
chr12 92933963 92933974 HOXC11 JASPAR yes 122779297
chr12 92933963 92933974 HOXC12 JASPAR yes 122779298
chr12 92933963 92933974 HOXC13 JASPAR yes 122779299
chr12 92933964 92933974 HOXD11 JASPAR yes 82453567
chr12 92933964 92933974 HOXD11 JASPAR yes 122779300
Genes associated with rs61936625[chr12:92933966], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More