EnhancerDB
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  3. rs62020569[chr15:41195689]
Enhancers that have rs62020569[chr15:41195689]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41192765 41214015 enh3543
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Heart
Transcript factors that have rs62020569[chr15:41195689]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41194949 41195710 ZNF143 GTRD no Epithelial (MCF-7) 21650917
chr15 41195044 41195712 ZNF274 GTRD no Bone Marrow (K562) 21650922
chr15 41195569 41195759 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21650928
chr15 41195679 41195698 CTCF JASPAR yes 22961215
chr15 41195687 41195695 TBX15 JASPAR yes 22961216
chr15 41195687 41195695 TBX1 JASPAR yes 22961217
chr15 41195687 41195695 TBX4 JASPAR yes 22961218
chr15 41195687 41195695 TBX5 JASPAR yes 22961219
Genes associated with rs62020569[chr15:41195689], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More