EnhancerDB
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  3. rs62028852[chr16:24526600]
Enhancers that have rs62028852[chr16:24526600]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 24526315 24540855 enh16608
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Stomach Placenta Lung (PC-9) Uterus Epithelial (MCF-7)
Transcript factors that have rs62028852[chr16:24526600]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 24524410 24527593 ZNF274 GTRD no Cervix (HeLa-S3) 21698890
chr16 24524410 24527593 ZNF274 GTRD no Cervix (HeLa-S3) 21698891
chr16 24524860 24526805 ZNF143 GTRD no Epithelial (MCF-7) 21698893
chr16 24525642 24526768 ZNF143 GTRD no Epithelial (MCF-7) 21698895
chr16 24525687 24526728 ZNF143 GTRD no Epithelial (MCF-7) 21698896
chr16 24525700 24527630 ZNF274 GTRD no Cervix (HeLa-S3) 21698897
chr16 24525738 24526815 ZNF143 GTRD no Epithelial (MCF-7) 21698898
chr16 24525753 24526855 ZNF143 GTRD no Epithelial (MCF-7) 21698899
chr16 24525791 24526773 ZNF143 GTRD no Epithelial (MCF-7) 21698900
chr16 24525795 24526966 ZNF274 GTRD no Cervix (HeLa-S3) 21698901
chr16 24525809 24526800 ZNF143 GTRD no Epithelial (MCF-7) 21698902
chr16 24525811 24526865 ZNF143 GTRD no Epithelial (MCF-7) 21698903
chr16 24525814 24526761 ZNF274 GTRD no Cervix (HeLa-S3) 21698904
chr16 24525814 24526851 ZNF274 GTRD no Cervix (HeLa-S3) 21698905
chr16 24525817 24526743 ZNF274 GTRD no Cervix (HeLa-S3) 21698906
chr16 24525843 24526856 ZNF143 GTRD no Epithelial (MCF-7) 21698907
chr16 24525861 24526934 ZNF274 GTRD no Cervix (HeLa-S3) 21698908
chr16 24525862 24526842 ZNF274 GTRD no Cervix (HeLa-S3) 21698909
chr16 24525873 24526827 ZNF143 GTRD no Epithelial (MCF-7) 21698910
chr16 24525879 24526833 ZNF274 GTRD no Cervix (HeLa-S3) 21698911
chr16 24525902 24526758 ZNF274 GTRD no Cervix (HeLa-S3) 21698912
chr16 24525907 24526832 ZNF143 GTRD no Epithelial (MCF-7) 21698913
chr16 24525908 24526761 ZNF274 GTRD no Cervix (HeLa-S3) 21698914
chr16 24525916 24526770 ZNF274 GTRD no Cervix (HeLa-S3) 21698915
chr16 24525920 24526874 ZNF274 GTRD no Cervix (HeLa-S3) 21698916
chr16 24525921 24526671 ZNF274 GTRD no Cervix (HeLa-S3) 21698917
chr16 24525925 24526893 ZNF274 GTRD no Cervix (HeLa-S3) 21698919
chr16 24525939 24526852 ZNF274 GTRD no Cervix (HeLa-S3) 21698920
chr16 24525996 24526652 ZNF274 GTRD no Cervix (HeLa-S3) 21698923
chr16 24526017 24526826 ZNF274 GTRD no Cervix (HeLa-S3) 21698924
chr16 24526024 24526647 ZNF143 GTRD no Epithelial (MCF-7) 21698925
chr16 24526037 24526699 ZNF274 GTRD no Cervix (HeLa-S3) 21698926
chr16 24526064 24526647 ZNF143 GTRD no Epithelial (MCF-7) 21698927
chr16 24526265 24526673 ZNF143 GTRD no Epithelial (MCF-7) 21698933
chr16 24526594 24526603 NFIX JASPAR yes 10068953
chr16 24526594 24526604 NFIA JASPAR yes 10068954
chr16 24526595 24526604 HIC2 JASPAR yes 10068955
chr16 24526596 24526602 NFIC JASPAR yes 10068956
Genes associated with rs62028852[chr16:24526600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More